Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015837660.1_cds_XP_016506682.1_19884
CDS Infomation

[gene=LOC107824438] [db_xref=GeneID:107824438] [protein=S-type anion channel SLAH2-like] [protein_id=XP_016506682.1] [location=join(18245..18418,19331..19825,20397..21167,21378..21409,21502..21913)] [gbkey=CDS]
Sequence

ATGGAAACAAGTGAAGTGACTAATTCAGCTAGGGATGATTCTACTGAAGTACTTCCACCC
CTTATCAAATTTATTTCTGATGAAATGGATGATTTTGATATCATAATAGATAATGATCAT
ATTGATAATCAACTTGATCAAACTGGATCTAATTTTGTGATCTCATCTATCGGGGGAACT
GAAGCCGCTGCTGAACGACAGCATGAAAGGAAGCATTCAGTTTCCATTAGCATGCCACAC
TCTCCTTTGGCAGCTCACTCACTAAGCCAAAAAAGAGTTGTCTTCAGTGATAATAATGAG
ATTATATTCAGCAATATTGACACTTCCGATTTTGTTGCTACATCAACTGATTCTGGTACC
AGACATAATAAAAAGGTCAAGTTTTATTCTCAGCCAATGCCAAGAAATACTGCATTTCCT
GAGGCTCCTGCTATTGGGAAACTTCCCAGCTATTCAGATTTTCCATCAATGAATCCCAAG
ATTATTAAGCAAAGGGATCCAAGGTTCAACTCTTTCAAAACATGGTCTGGTAAACTTGAG
AGACAATTAACAAATTTGCGTGGAAAGAATCTGGAAGCACAGCAAGAGTCGAATACTGCA
GAGAGAGAAAATATCCCAGTACATCGATACTTTGATGCGTTGGAGGGACCAGAATTGGAC
ACTCTACGGGCTTCTGAGCAAAGTATTCTTCCAGAGGACAAGAAATGGCCATTTCTTCTT
CGATTCCCTATTTCTTCCTTTGGTATATGTCTTGGTGTTAGTAGCCAAGCTATTATGTGG
AAAGCTCTAGCCACTTCTCCGTCAACGAAATTCCTCCACGTAAGCTTGAACATGAATCTT
GTCCTTTGGTGCATTTCTGTGGCCCTTATGGCCATTGTTGCTTTCATATATGCTCTGAAA
ATCATTTTCTACTTCGAAGCAGTTCGTCGTGAATACTATCACCCGATACGTGTTAACTTC
TTCTTTGCTCCGTGGATAGCACTTCTATTCTTAGCACTAGGATTTCCACCATCAGTTACT
AAAAACCTGCACACATCTCTGTGGTACATTCTTATGACCCCAATCTTTTGCTTAGAGCTG
AAGATCTATGGACAATGGATGTCTGGAGGACAGCGAAGGCTCTCAAAGGTTGCCAGCCCC
GTAAATCATCTCTCTGTCGTTGGAAATTTCGTAGGTGCTTTGCTTGGTGCATCCATGGGA
CTAAAAGAAGGCCCAATATTCTTCTATGCTGTTGGATTGGCTCATTATTTAGTCCTATTT
GTAACTCTTTACCAAAGACTTCCAACAAATGAGACGCTGCCAAAGGAGCTTCACCCGGTC
TTCTTTCTATTTGTTGCTGCACCTAGTGTTGCTTCTATGGCATGGGCAGCAATCCAAGGG
TCCTTCGATTATGGATCTCGGATTTCTTATTTCATTGCCCTCTTCCTTTATTTCTCACTG
GCTGTTCGTATTAATTTCTTCCGAGGCTTCAGGTTTTCATTGGCGTGGTGGGCGTATACT
TTCCCCATGACCGGAGCTGCTATTGCCACTGTCAGGTACTCAACTGCCGTTACCAACACA
GCGACAAAGTGTCTAGCAGTCATACTTTGCTCTCTTGCTACACTAACAGTAACAGCACTG
CTTGTGACAACTATCATCTATGCCTTTGTTCTGAGAGACCTCTTCCCAAATGATATTTCA
ATTGCAATTAGTGAAAGGAGGCATAAAACAACTGGATTATGGCATATTAGAAGATTTGGC
AGCTCAGATGCCAATGATATTGAGCAATATCTTAAATTTGTAGATTCTTCAGATGGAAAA
GACATTGAGGCTTCTCTTACACATCCAAACTCTAGTACCATAGAGTTGAGCACCTCTGCC
CCAAATGAAGTTCGTCAACAATGA

Peptide Sequence

PEP ID

XP_016506682.1
PEP Infomation

PREDICTED: S-type anion channel SLAH2-like [Nicotiana tabacum]
Sequence

METSEVTNSARDDSTEVLPPLIKFISDEMDDFDIIIDNDHIDNQLDQTGSNFVISSIGGT
EAAAERQHERKHSVSISMPHSPLAAHSLSQKRVVFSDNNEIIFSNIDTSDFVATSTDSGT
RHNKKVKFYSQPMPRNTAFPEAPAIGKLPSYSDFPSMNPKIIKQRDPRFNSFKTWSGKLE
RQLTNLRGKNLEAQQESNTAERENIPVHRYFDALEGPELDTLRASEQSILPEDKKWPFLL
RFPISSFGICLGVSSQAIMWKALATSPSTKFLHVSLNMNLVLWCISVALMAIVAFIYALK
IIFYFEAVRREYYHPIRVNFFFAPWIALLFLALGFPPSVTKNLHTSLWYILMTPIFCLEL
KIYGQWMSGGQRRLSKVASPVNHLSVVGNFVGALLGASMGLKEGPIFFYAVGLAHYLVLF
VTLYQRLPTNETLPKELHPVFFLFVAAPSVASMAWAAIQGSFDYGSRISYFIALFLYFSL
AVRINFFRGFRFSLAWWAYTFPMTGAAIATVRYSTAVTNTATKCLAVILCSLATLTVTAL
LVTTIIYAFVLRDLFPNDISIAISERRHKTTGLWHIRRFGSSDANDIEQYLKFVDSSDGK
DIEASLTHPNSSTIELSTSAPNEVRQQ

Transcript Sequence

Gene sequence data has not been registered.